Making Science Free for Everyone Around the World 🌍
I'm a postdoctoral researcher with a strong interest in computational biology, systems biology, and bioinformatics.
I develop bioinformatics pipelines and computational workflows for omics data and other high-dimensional datasets.
I am also fascinated by protein chemistry and structural biology, using PyMOL scripting to study protein intra- and intermolecular interactions, including ligand and drug binding mechanisms.
- Multi-omics data integration and analysis pipelines
- Computational workflows for proteomics/metabolomics datasets
- Protein–protein and protein–ligand interaction analysis
- PyMOL automation for structural biology
- practical-MS-MS-PLS-DA-analysis-pipeline
PLS-DA implementation optimized for small sample proteomics/metabolomics datasets. - PLSDA-MSMS-Analysis
Practical analysis pipeline for MS/MS data with statistical classification. - Complete Protein-Protein Interaction Analysis Workflow A comprehensive, end-to-end workflow for predicting, visualizing, and validating protein-protein interactions. Includes AlphaFold3 integration, PyMOL visualization scripts, Arpeggio interaction detection, and quantitative validation against experimental structures.
- Email: [ayehgeek@gmail.com or ayehbolouki1988@gmail.com](mailto:ayehgeek@gmail.com or ayehbolouki1988@gmail.com)
- LinkedIn: Ayeh Bolouki (https://www.linkedin.com/in/ayehbolouki/)
- Computational Biology 🧬
- Systems Biology 🧠
- Bioinformatics Pipelines 💻
- Omics Data Analysis 📊
- Proteomics & Metabolomics 🧫
- Protein Chemistry & Structural Biology 🔬
- PyMOL Scripting & Molecular Interactions 🧪
- Statistical Analysis & PLS-DA 📈
- Network Analysis & WGCNA 🌐
- Data Visualization (Python, R) 📉