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Locator

Locator is a supervised machine learning method for predicting the geographic origin of a sample from genotype or sequencing data. A manuscript describing it and its use can be found at https://elifesciences.org/articles/54507

Documentation

Full documentation is available at https://relocator.readthedocs.io/en/latest/.

Quick Install

The easiest way to install relocator is to download the github repo and run the setup script. It's usually a good idea to do this in a new conda environment:

conda create --name locator
conda activate locator
git clone https://github.com/kr-colab/relocator.git
cd locator
pip install .

License

This software is available free for all non-commercial use under the non-profit open software license v 3.0 (see LICENSE.txt).

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modular API for genetic geolocation using deep neural networks (i.e. version 2 of locator)

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